BiPad Web Server

Author: Dr. C. Bi [comments to cbi at cmh.edu], Copyright: (C) 2003-2008 Children's Mercy Hospitals and Clinics

---

*Username: Password:

*Project title:

Search pattern: single block bipartite Widths: ,    Gaps: ,

Alignment mode: forward strand both strands   Cycles:   Top: 1 0   Refine: off on

*DNA sequences (FASTA): >CE1CG (CRP binding sites) TAATGTTTGTGCTGGTTTTTGTGGCATCGGGCGAGAATAGCGCGTGGTGTGAAAGACTGT TTTTTTGATCGTTTTCACAAAAATGGAAGTCCACAGTCTTGACAG >ECOARABOP GACAAAAACGCGTAACAAAAGTGTCTATAATCACGGCAGAAAAGTCCACATTGATTATTT GCACGGCGTCACACTTTGCTATGCCATAGCATTTTTATCCATAAG >ECOBGLR1 ACAAATCCCAATAACTTAATTATTGGGATTTGTTATATATAACTTTATAAATTCCTAAAA TTACACAAAGTTAATAACTGTGAGCATGGTCATATTTTTATCAAT >ECOCRP CACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGC ATGTATGCAAAGGACGTCACATTACCGTGCAGTACAGTTGATAGC >ECOCYA ACGGTGCTACACTTGTATGTAGCGCATCTTTCTTTACGGTCAATCAGCAAGGTGTTAAAT TGATCACGTTTTAGACCATTTTTTCGTCGTGAAACTAAAAAAACC >ECODEOP2 AGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTA ATTGTGATGTGTATCGAAGTGTGTTGCGGAGTAGATGTTAGAATA >ECOGALE GCGCATAAAAAACGGCTAAATTCTTGTGTAAACGATTCCACTAATTTATTCCATGTCACA CTTTTCGCATCTTTGTTATGCTATGGTTATTTCATACCATAAGCC >ECOILVBPR GCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCAATT TTCCCTTTGCTGAAAAATTTTCCATTGTCTCCCCTGTAAAGCTGT >ECOLAC AACGCAATTAATGTGAGTTAGCTCACTCATTAGGCACCCCAGGCTTTACACTTTATGCTT CCGGCTCGTATGTTGTGTGGAATTGTGAGCGGATAACAATTTCAC >ECOMALE ACATTACCGCCAATTCTGTAACAGAGATCACACAAAGCGACGGTGGGGCGTAGGGGCAAG GAGGATGGAAAGAGGTTGCCGTATAAAGAAACTAGAGTCCGTTTA >ECOMALK GGAGGAGGCGGGAGGATGAGAACACGGCTTCTGTGAACTAAACCGAGGTCATGTAAGGAA TTTCGTGATGTTGCTTGCAAAAATCGTGGCGATTTTATGTGCGCA >ECOMALT GATCAGCGTCGTTTTAGGTGAGTTGTTAATAAAGATTTGGAATTGTGACACAGTGCAAAT TCAGACACATAAAAAAACGTCATCGCTTGCATTAGAAAGGTTTCT >ECOOMPA GCTGACAAAAAAGATTAAACATACCTTATACAAGACTTTTTTTTCATATGCCTGACGGAG TTCACACTTGTAAGTTTTCAACTACGTTGTAGACTTTACATCGCC >ECOTNAA TTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTG CTCCCCGAACGATTGTGATTCGATTCACATTTAAACAATTTCAGA >ECOUXU1 CCCATGAGAGTGAAATTGTTGTGATGTGGTTAACCCAATTAGAATTCGGGATTGACATGT CTTACCAAAAGGTAGAACTTATACGCCATCTCATCCGATGCAAGC >PBR322 CTGGCTTAACTATGCGGCATCAGAGCAGATTGTACTGAGAGTGCACCATATGCGGTGTGA AATACCGCACAGATGCGTAAGGAGAAAATACCGCATCAGGCGCTC >TRN9CAT CTGTGACGGAAGATCACTTCGCAGAATAAATAAATCCTGGTGTCCCTGTTGATACCGGGAA GCCCTGGGCCAACTTTTGGCGAAAATGAGACGTTGATCGGCACG >TDC GATTTTTATACTTTAACTTGTTGATATTTAAAGGTATTTAATTGTAATAACGATACTCTG GAAAGTATTGAAAGTTAATTTGTGAGTGGTCGCACATATCCTGTT Or upload a file:

SeqModel: OOPS ZOOPS   Flanking: ,   (bps)    Results: email online

* required field. To have a trial, simply click on START button. Click here back to home.

---

Last modified: October 2, 2007 by Dr. Chengpeng Bi, Kansas City, MO, USA